Links for Keyword: Brain imaging

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Will DNA Barcodes And A Sneaky Virus Change The Way Scientists Map The Brain?

By Ferris Jabr Scientists have mapped, charted, modeled and visualized the human brain in many different ways. They have marked the boundaries of the organ’s four major lobes: the frontal, parietal, temporal and occipital lobes. They have divvied up the cortex into more than 50 Broadmann areas—small regions characterized by particular cell types and specific cognitive functions, such as processing speech and recognizing faces. Researchers have tagged individual neurons with fluorescent proteins, transforming gray tissue into stunning brainbows, and followed water molecules as they move through the nervous system to trace ribbons of neural tissue linking one brain region to another. More recently, some scientists have championed the importance of connectomes—detailed wiring diagrams of all the connections between neurons in a given nervous system or brain. Thoroughly understanding the brain, proponents of connectomics argue, requires precise maps of its neural circuits. The standard way of making a connectome is serial electron microscopy—chopping up an animal’s brain into thin sheets, taking photos of all the resident neurons through an electron microscope and using those photos to painstakingly reconstruct the connections between neurons. In the 1970s biologist Sydney Brenner and his colleagues began using this technique to map the 302 neurons and 7,000 neural connections, or synapses, in the nervous system of a tiny worm known as Caenorhabditis elegans. It took them more than 12 years to finish the map. So far, C. elegans is the only animal with such a thorough connectome. Since mammalian brains contain millions or billions of neurons and billions or trillions of synapses, depending on the species, researchers are searching for faster and cheaper ways to create connectomes. At Harvard University, for example, Jeff Lichtman and his colleagues have constructed an Automatic Tape-Collecting Lathe Ultramicrotome (ATLUM)—a machine that speeds up the business of slicing up brain tissue into thin sheets with conveyor-belt efficiency. © 2012 Scientific American

Related chapters from BP7e: Chapter 2: Functional Neuroanatomy: The Nervous System and Behavior
Related chapters from MM:Chapter 2: Cells and Structures: The Anatomy of the Nervous System
Link ID: 17417 - Posted: 10.24.2012

Neuroscientists: Mercenaries in the Courtroom

By David DiSalvo Neuroscientists aren’t usually thought of as advocates for special interests. They’re a generally objective bunch, dedicated to their discipline and concerned above all with making solid contributions to understanding how our brains work. Advances in understanding and treating Alzheimer’s, Parkinson’s, multiple sclerosis, and a host of other diseases and conditions are largely attributable to the commitment of neuroscientists focused on solving some of the most difficult problems in medicine. But, over the past decade, as neuroscience—and brain imaging in particular—has become a star science attraction, the role of the impartial neuroscientist has been redefined. When the forces of marketing realized that neuroscience could assist in predicting consumer behavior, neuroscientists became a hot commodity as “consultants” to some of the biggest brands on the planet. Soon “neuromarketing” was born, and firms armed with fMRI machines started becoming mainstays at consumer focus groups for Fortune 500 companies. A similar story is playing out in the legal arena—but the stakes are much higher. When neuroscientists are recruited to weigh in on critical issues like lie detection and the alleged mental state of a defendant, people’s lives, and not just their wallets, are directly affected. But much of this technology is too new to be reliable. Furthermore, neuroscience experts aren’t just being used on the stand—they are also being paid to help select, even sway, juries, and that poses an entirely new ethical dilemma. © 2012 The Slate Group, LLC

Related chapters from BP7e: Chapter 15: Emotions, Aggression, and Stress; Chapter 2: Functional Neuroanatomy: The Nervous System and Behavior
Related chapters from MM:Chapter 11: Emotions, Aggression, and Stress; Chapter 2: Cells and Structures: The Anatomy of the Nervous System
Link ID: 17388 - Posted: 10.20.2012

High-resolution Brain Atlas finished

The human brain is big and complicated. There has been a map for gene expression in mice brains available for a number of years but human brains are a thousand times bigger and a little harder to come by for post-mortem research. But published today is a high-resolution 3D atlas of the human brain created by an international team led by Michael Hawrylycz of the Allen Institute for Brain Science in Seattle. The project was launched in March 2008 with a budget of $55 million. Working with just two whole male brains and a single hemisphere from a third, the team used around 900 precise subdivisions and 60,000 gene expression probes to create the atlas. This image is a 3D rendering of just one of the genes in internal brain structures overlaid onto an MRI scan. The level of gene expression at the different points on the map is indicated on a colour scale, with blue dots reflecting relatively low expression and red dots reflecting high expression. The aim of the project is to provide a platform for further study into gene expression in the brain and how it is involved in normal and abnormal brain function. The Allen Brain Atlas is freely accessible online. Journal reference: Nature, DOI: 10.1038/nature11405 © Copyright Reed Business Information Ltd.

Related chapters from BP7e: Chapter 2: Functional Neuroanatomy: The Nervous System and Behavior; Chapter 7: Life-Span Development of the Brain and Behavior
Related chapters from MM:Chapter 2: Cells and Structures: The Anatomy of the Nervous System; Chapter 13: Memory, Learning, and Development
Link ID: 17288 - Posted: 09.22.2012

Waste disposal network discovered in the brain

by Molly Docherty The brain drain is real. There is a network of previously unrecognised vessels that rid the brain of unwanted extracellular fluids and other substances, including amyloid-beta – a peptide that accumulates in the brain of people with Alzheimer's. The new discovery looks set to add to our understanding of the disease. Jeffrey Iliff at the University of Rochester Medical Center, New York, and his colleagues, were intrigued by the fact that there are no obvious lymphatic vessels in the brain. Among other things, the lymphatic system removes waste interstitial fluids from body tissue. "It seemed strange that such an important and active organ wouldn't have a specialised waste-removal system," says Iliff. When the researchers added fluorescent and radioactive tracers to the cerebrospinal fluid of live mice, the tracers quickly spread throughout the rodents' brains. Using two-photon microscopy to visualise the movement in real-time, the team saw cerebrospinal fluid permeating the entire brain through 'pipes' surrounding blood vessels, similar to the lymphatic system that services all other organs. The pipes work on hydraulic principles, though, and so the system breaks upon opening, making it hard to identify it outside living organisms. © Copyright Reed Business Information Ltd.

A Single Brain Structure May Give Winners That Extra Physical Edge

By Sandra Upson All elite athletes train hard, possess great skills and stay mentally sharp during competition. But what separates a gold medalist from an equally dedicated athlete who comes in 10th place? A small structure deep in the brain may give winners an extra edge. Recent studies indicate that the brain's insular cortex may help a sprinter drive his body forward just a little more efficiently than his competitors. This region may prepare a boxer to better fend off a punch his opponent is beginning to throw as well as assist a diver as she calculates her spinning body's position so she hits the water with barely a splash. The insula, as it is commonly called, may help a marksman retain a sharp focus on the bull's-eye as his finger pulls back on the trigger and help a basketball player at the free-throw line block out the distracting screams and arm-waving of fans seated behind the backboard. The insula does all this by anticipating an athlete's future feelings, according to a new theory. Researchers at the OptiBrain Center, a consortium based at the University of California, San Diego, and the Naval Health Research Center, suggest that an athlete possesses a hyper-attuned insula that can generate strikingly accurate predictions of how the body will feel in the next moment. That model of the body's future condition instructs other brain areas to initiate actions that are more tailored to coming demands than those of also-rans and couch potatoes. This heightened awareness could allow Olympians to activate their muscles more resourcefully to swim faster, run farther and leap higher than mere mortals. In experiments published in 2012, brain scans of elite athletes appeared to differ most dramatically from ordinary subjects in the functioning of their insulas. © 2012 Scientific American

Related chapters from BP7e: Chapter 11: Motor Control and Plasticity; Chapter 2: Functional Neuroanatomy: The Nervous System and Behavior
Related chapters from MM:Chapter 5: The Sensorimotor System; Chapter 2: Cells and Structures: The Anatomy of the Nervous System
Link ID: 17088 - Posted: 07.25.2012

Neuroscience Or Neurobabble?

Rebecca Goldin, Ph.D., Cindy S. Merrick With the news media telling us that neuroscience – and brain scans – can explain everything from a global pandemic of Justin Bieber fever to whether you are likely to stay with your spouse, we investigate what neuroscience can and can’t tell us about who we are and why we do the things we do. In the first part of an ongoing series, we look at functional magnetic resonance imaging, and whether it’s really the window on the mind that some in the media – and science – would have us believe. Gone are the days when the only people who believed in technologies that could read minds were distinguishable from the rest of us by their tin foil hats. With the advent of functional magnetic resonance imaging (fMRI), we are able to see, in near-video quality, the ebb and flow of a live mind at work. Or so it seems. Something, for certain, is at work, and there are lots of people willing to tell you they know exactly how to interpret what we can see. Certainly this new technology has already produced fascinating results: surgeons use it real-time to avoid critical regions while operating on brain tumors; physicians use it to look for changes in the brain activity of stroke victims as they experience physical rehabilitation; and fMRI data showing activity in the brains of patients thought to be in a vegetative state may be blurring the line that defines consciousness. Along with these advances, though, have appeared many somewhat less credible stories. The media reports claims ranging from fMRI’s ability to detect lies to its predicting future addictive behavior or determining whether or not you really love your spouse, or, maybe, your iPhone. Already, attempts have been made to use fMRI as admissible evidence of lie detection in court (so far, they have failed); and in another court case, fMRI results and a neuroscientist’s testimony were admitted in the sentencing hearing. The data were used as evidence that the defendant, a violent offender, was psychopathic.

Neuron forest grows out of brain trauma experiment

Will Ferguson, reporter You can't visit this tropical jungle. It's a forest of neurons snaking through a pig's brain. The brain cells, enlarged and coloured here, are being investigated to give scientists a clearer view of the mechanics of brain matter when it is hit hard. Michel Destrade, an applied mathematician at the National University of Ireland, Galway, and colleagues obtained samples of pig brains from a local slaughterhouse to study the mechanics of brain matter undergoing rapid impacts. With the aim of improving the treatment of traumatic head injuries, they used the samples to create computer models of electrical signals inside the brain. But during the course of the experiment, Destrade's student Badar Rashid decided to find out what white and grey matter inside a brain look like. He started with an image of neuron bundles taken using scanning electron microscopy, and blew it up to 4,000 times its actual size. He then added colour to the black and white result according to his own aesthetic. The image appears in Physics Today (DOI:10.1063/PT.3.1651). © Copyright Reed Business Information Ltd.

Controversial science of brain imaging

By Mahir Ozdemir Hardly a week passes without some sensational news about brain scans unleashing yet another secret of our cognitive faculties. Very recently I stumbled upon the news that according to recent research neuroscientists can tell, depending on your brain responses, whether you and your significant one will still be together in a few years: “You might hide it from friends and family. But you can’t hide it from neuroscientists”. The technique at the bottom of the study, just like the majority of studies making a big splash, is functional magnetic resonance imaging, fMRI. Researchers have been struggling to unfold ‘what’s under the hood’ through the lens of Neuroscience and they have been finding all sorts of insights into human behavior. They have been looking at everything from how multitasking is harder for seniors to how people love talking about themselves. Neural basis of love and hatred, compassion and admiration have all been studied with fMRI, yielding colored blobs representing the corresponding love or hatred centers in our brains. First a brief background: The fMRI technique measures brain activity indirectly via changes in blood oxygen levels in different parts of the brain as subjects participate in various activities. While lying down with head immobilized in a small confined chamber of the notoriously noisy MR scanner, subjects are shown experimental stimuli. They wear earplugs to reduce at least some part of the noise while performing these cognitive tasks. © 2012 Scientific American

What’s a Voxel and What Can It Tell Us? A Primer on fMRI

By Daisy Yuhas At right is a picture of someone’s brain as seen through functional magnetic resonance imaging or fMRI. This particular subject is taxing his neurons with a working memory task—those sunny orange specks represent brain activity related to the task. fMRI images show the brain according to changes in blood oxygen level, a proxy for degree of mental activity. It’s a pretty amazing tool; it has validated a lot of assumptions about brain regions and helped us make comparisons between groups of people, shedding light on addiction, development and disease. Some scientists believe it can help us read minds (more on that later) or even predict the future. But fMRI doesn’t actually provide detail at the level of a cell. The 3-dimensionsal image it provides is built up in units called voxels. Each one represents a tidy cube of brain tissue—a 3-D image building block analogous to the 2-D pixel of computers screens, televisions or digital cameras. Each voxel can represent a million or so brain cells. Those orange blobs in the image above are actually clusters of voxels—perhaps tens or hundreds of them. fMRI is also too slow to capture all of the changes in the brain. Each scan requires a second or two, enough time for a neuron to fire more than a hundred times. That means it can’t provide a clear sense of precisely when things happen. Trying to explain whether activity in one spot causes activity in another is not possible through fMRI alone. Furthermore, you have to be careful with your conclusions. Just because voxels corresponding to one region ‘light up’ when your subject sees a terrifying tiger doesn’t mean that every time this region appears active, your subject is frightened. Many of the brain’s regions are quite complex and involved in multiple processes. © 2012 Scientific American

The Problem With Neuroscience Narratives

Neuroscientist and friend of the blog Bradley Voytek has a terrific piece about the relationship between popular science writing and neuroscience that’s well worth your time. In brief, he says, the primary problem are neuroscientists themselves. Or at least, some of the assumptions that neuroscientists make. The problem, he notes, is a problem that long term readers here are familiar with – the confusion of cause and effect, as well as an over-reductionist view of the brain. Namely, that imaging studies showing a portion of the brain “lighting up” when something happens means that that area of the brain is directly involved in the activity. Something that he analogizes to “like how when your arms swing faster when you run that means that your arms are ‘where running happens’.” Voytek also provides what I think is one of the best analogies I’ve read about the problem inherent in trying to isolate “which part of the brain does X”: Imagine asking “where is video located in my computer?” That doesn’t make any sense. Your monitor is required to see the video. Your graphics card is required to render the video. The software is required to generate the code for the video. But the “video” isn’t located anywhere in the computer. This is something that I think is exactly right. The best neuroscientists out there are, I think, very aware of this problem, but I think part of what’s going on here is the inherent limitations of our ability to experiment. Take fMRI’s, for example, which have provided an interesting look into what kinds of activity is going on in the brain while the person being imaged is doing or thinking something. It’s one of the best pieces of equipment available, but it’s very nature can be deceiving. Because it’s one of the few ways available to figure out what’s going on in the brain, it can be tempting to see what is measured by an fMRI image as definitive. 2012 Forbes.com LLC™

CT scans on children 'could triple brain cancer risk'

By Jane Dreaper Health correspondent, BBC News Multiple CT scans in childhood can triple the risk of developing brain cancer or leukaemia, a study suggests. The Newcastle University-led team examined the NHS medical records of almost 180,000 young patients. But writing in The Lancet the authors emphasised that the benefits of the scans usually outweighed the risks. They said the study underlined the fact the scans should only be used when necessary and that ways of cutting their radiation should be pursued. During a CT (computerised tomography) scan, an X-ray tube rotates around the patient's body to produce detailed images of internal organs and other parts of the body. In the first long-term study of its kind, the researchers looked at the records of patients aged under 21 who had CT scans at a range of British hospitals between 1985 and 2002. Because radiation-related cancer takes time to develop, they examined data on cancer cases and mortality up until 2009. The study estimated that the increased risk translated into one extra case of leukaemia and one extra brain tumour among 10,000 CT head scans of children aged under ten. BBC © 2012

Speedy pH changes detected in brain for first time

by Linda Geddes SECOND by second changes in the brain's pH can be visualised for the first time. This ability may provide fresh insights into learning, memory and disease. Oxygen deprivation can alter the brain's pH, and even normal brain signals from acidic neurotransmitters or metabolic by-products such as lactic acid may lead to local changes in pH. Studies in mice have also uncovered pH-sensitive receptors in brain areas involved in emotion and memory - although their function is something of a mystery. "If these receptors are activated by pH change, it's possible that abnormalities in this system could lead to changes in learning, memory and mood," says Vincent Magnotta at the University of Iowa in Iowa City. A common way of studying the brain is with an MRI scanner, which detects differences in the spin of protons in tissues according to water content. Although brain pH can be measured using a form of MRI called MR spectroscopy, it only detects changes that occur over minutes - not fast enough to keep up with the rapid pace of the brain. T1ρ MRI analyses the interaction between spinning protons and other ions in a solution, which changes under different pHs. By tweaking the technique so that multiple measurements could be taken simultaneously, Magnotta and his colleagues have found that T1ρ MRI can detect changes in brain acidity happening over seconds. © Copyright Reed Business Information Ltd.

The Brain's Highways: Mapping the Last Frontier

By Partha Mitra Frontiers are in short supply. No explorer will again catch that first glimpse of the Pacific Ocean with “wild surmise,” take the first steps on the moon, or arrive first at the Challenger deep – the remotest corners of the earth are now tourist attractions. Even in science, great mysteries have fallen – life itself has gone from being the subject of metaphysical speculation about vital substances to the biophysical understanding of cellular processes. Uncharted territories, both physical and metaphorical, are hard to find. Yet there is one largely unmapped continent, perhaps the most intriguing of them all, because it is the instrument of discovery itself: the human brain. It is the presumptive seat of our thoughts, and feelings, and consciousness. Even the clinical criteria for death feature the brain prominently, so it arbitrates human life as well. One would think, that after a century of intensive research, its outlines would be well known to us: after all, colorful pictures of brain activity have been making regular appearances in the news media for some time. However, if one scratches the surface, our knowledge of how the human brain is put together remains limited: not in some esoteric, complicated manner, but in the straightforward sense that we have simply no means to visualize entire neurons in the brain (and the brain, being a collection of neurons, therefore remains a shut book in important ways). We can’t see them in their full glory, even with all our advanced technology. The problem is that compared to other cells visualized under a microscope, neurons are at the same time very small, and very big. While their soma (cell bodies) are like other cells, neurons can send out branches (axons) that travel very long distances, sometimes several feet, which don’t fit into the sections of tissue that we do histology on. © 2012 Scientific American,

Human brain prosciutto builds up 3D atlas

Sandrine Ceurstemont, editor, New Scientist TV Imagine being able to zoom into a human brain in extreme detail as you would navigate through Google Earth. This summer, a digital brain atlas being developed by neuroanatomist Jacopo Annese and his team from University of California, San Diego, will be available online, allowing people to interact with the brain's anatomy down to the level of the cell. The digital display is being created from slices of the brain of Henry Gustav Molaison, who lost his ability to form new long-term memories after a brain operation to treat epilepsy. By working with his brain, the team are building a 3D model in much higher resolution than is possible from MRI scans. To prepare a brain for dissection, it is first preserved in a process that takes months and then frozen. Next it is placed in a motorised tissue slicer specially built by Annese and his team to accommodate an organ as big as the brain (see video). A blade peels away layers about as thick as a human hair, which look like super-thin slices of prosciutto. They are collected with a paintbrush and placed in a salty solution. The sections are then laid out on glass slides so that they can be stained once dry. The purple dye used in the video stains genetic material in each cell, making fine anatomical structures visible. © Copyright Reed Business Information Ltd.

What was that dog thinking? Brain scan can now tell us

By Jeanna Bryner Managing editor Fido's expressive face, including those longing puppy-dog eyes, may lead owners to wonder what exactly is going on in that doggy's head. Scientists decided to find out, using brain scans to explore the minds of our canine friends. The researchers, who detailed their findings May 2 in the open-access journal PLoS ONE, were interested in understanding the human-dog relationship from the four-legged perspective. "When we saw those first (brain) images, it was unlike anything else," said lead researcher Gregory Berns in a video interview posted online. "Nobody, as far as I know, had ever captured images of a dog's brain that wasn't sedated. This was (a) fully awake, unrestrained dog, here we have a picture for the first time ever of her brain," added Berns, who is director of the Emory University Center for Neuropolicy. He added, "Now we can really begin to understand what dogs are thinking. We hope this opens a whole new door into canine cognition, social cognition of other species." Berns realized dogs could be trained to sit still in a brain-scanning machine after hearing that a U.S. Navy dog had been a member of the SEAL team that killed Osama bin Laden. "I realized that if dogs can be trained to jump out of helicopters and airplanes, we could certainly train them to go into an fMRI to see what they're thinking," Berns said. © 2012 msnbc.com

Myth, busted: You only use 10 percent of brain

By Brian Alexander Good news for all those who ever had a teacher or a parent say “If you would just apply yourself you could learn anything! You’re only using 10 percent of your brain!” All those people were wrong. If we did use only 10 percent of our brains we’d be close to dead, according to Eric Chudler, director of the Center for Sensorimotor Neural Engineering at the University of Washington, who maintains an entertaining brain science website for kids. “When recordings are made from brain EEGs, or PET scans, or any type of brain scan, there’s no part of the brain just sitting there unused,” he said. Larry Squire, a research neuroscientist with the Veterans Administration hospital in San Diego, and at the University of California San Diego, pointed out that “any place the brain is damaged there is a consequence.” Damaged brains may have been where this myth originated. During the first half of the last century, a pioneering neuroscientist named Karl Lashley experimented on rodents by excising portions of their brains to see what happened. When he put these rodents in mazes they’d been trained to navigate, he found that animals with missing bits of brain often successfully navigated the mazes. This wound up being transmuted into the idea humans must be wasting vast brain potential. With the rise of the human potential movement in the 1960s, some preached that all sorts of powers, including bending spoons and psychic abilities, were laying dormant in our heads and that all we had to do was get off our duffs and activate them. © 2012 msnbc.com

Related chapters from BP7e: Chapter 1: Biological Psychology: Scope and Outlook; Chapter 2: Functional Neuroanatomy: The Nervous System and Behavior
Related chapters from MM:Chapter 1: An Introduction to Brain and Behavior; Chapter 2: Cells and Structures: The Anatomy of the Nervous System
Link ID: 16676 - Posted: 04.19.2012

Can a Brain Scan Tell You What Drugs to Take and Choices to Make?

by Carl Zimmer Ahmad Hariri stands in a dim room at the Duke University Medical Center, watching his experiment unfold. There are five computer monitors spread out before him. On one screen, a giant eye jerks its gaze from one corner to another. On a second, three female faces project terror, only to vanish as three more female faces, this time devoid of emotion, pop up instead. A giant window above the monitors looks into a darkened room illuminated only by the curve of light from the interior of a powerful functional magnetic resonance imaging (fMRI) scanner. A Duke undergraduate—we’ll call him Ross—is lying in the tube of the scanner. He’s looking into his own monitor, where he can observe pictures as the apparatus tracks his eye movements and the blood oxygen levels in his brain. Ross has just come to the end of an hour-long brain scanning session. One of Hariri’s graduate students, Yuliya Nikolova, speaks into a microphone. “Okay, we’re done,” she says. Ross emerges from the machine, pulls his sweater over his head, and signs off on his paperwork. As he’s about to leave, he notices the image on the far-left computer screen: It looks like someone has sliced his head open and imprinted a grid of green lines on his brain. The researchers will follow those lines to figure out which parts of Ross’s brain became most active as he looked at the intense pictures of the women. He looks at the brain image, then looks at Hariri with a smile. “So, am I sane?” Hariri laughs noncommitally. “Well, that I can’t tell you.” © 2012, Kalmbach Publishing Co.

Brain imaging: fMRI 2.0

Kerri Smith The blobs appeared 20 years ago. Two teams, one led by Seiji Ogawa at Bell Laboratories in Murray Hill, New Jersey, the other by Kenneth Kwong at Massachusetts General Hospital in Charlestown, slid a handful of volunteers into giant magnets. With their heads held still, the volunteers watched flashing lights or tensed their hands, while the research teams built the data flowing from the machines into grainy images showing parts of the brain illuminated as multicoloured blobs. The results showed that a technique called functional magnetic resonance imaging (fMRI) could use blood as a proxy for measuring the activity of neurons — without the injection of a signal-boosting compound1, 2. It was the first demonstration of fMRI as it is commonly used today, and came just months after the technique debuted — using a contrast agent — in humans3. Sensitive to the distinctive magnetic properties of blood that is rich in oxygen, the method shows oxygenated blood flowing to active brain regions. Unlike scanning techniques such as electroencephalography (EEG), which detects electrical activity at the skull's surface, fMRI produces measurements from deep inside the brain. It is also non-invasive, which makes it safer and more comfortable than positron emission tomography (PET), in which radioactive compounds are injected and traced as they flow around the body. fMRI has been applied to almost every aspect of brain science since. It has shown that the brain is highly compartmentalized, with specific regions responsible for tasks such as perceiving faces4 and weighing up moral responsibility5; that the resting brain is in fact humming with activity6; and that it may be possible to communicate with patients in a vegetative state by monitoring their brain activity7. In 2010, neuroscientists used fMRI in more than 1,500 published articles (see 'The rise of fMRI'). © 2012 Nature Publishing Group

Billionaire Paul Allen kicks off 'brain observatory' effort with $300 million

By Alan Boyle Software billionaire Paul Allen is pledging $300 million to establish a series of "brain observatories" at the Seattle research facility named after him, with the aim of mapping and manipulating the mouse brain. The project's leaders say the insights gained could be applied as well to higher forms of life, including humans. "We believe that this project has the potential to revolutionize our understanding of the mammalian brain," Christoph Koch, chief scientific officer for the Allen Institute for Brain Science, and Harvard neuroscientist R. Clay Reid said in the journal Nature. Details about the brain observatory project were laid out today at the Allen Institute in Seattle. In an advance interview, Koch cast the effort in terms usually reserved for the multibillion-dollar Hubble Space Telescope project or the $10 billion Large Hadron Collider. "We're focusing a huge amount of resources on trying to understand this piece of highly, highly complex math and science. The most organized piece of matter in the known universe is the cerebral cortex, the one that makes you and me think and smell and hear and talk. That's what we're trying to understand," Koch told me. "Just as people spend a huge amount of time and effort to build these different observatories to look at the origin of space and time, we're going to build these observatories, these very sophisticated instruments, all of them using common standards, all peering at the brain — primarily animal brains, but also the human brain." © 2012 msnbc.com

Neuroscience: Observatories of the mind

Christof Koch & R. Clay Reid Neuroscience is a splintered field. Some 10,000 laboratories worldwide are pursuing distinct questions about the brain across a panoply of spatio-temporal scales and in a dizzying variety of animal species, behaviours and developmental time-points. At any large neuroscience meeting, one is struck by the pace of discovery, with 50,000 or more practitioners heading away from each other in all directions, in a sort of scientific Big Bang. Although this independence is necessary, it has prevented neuroscience from entering a more mature phase, which would involve developing common standards and collaborative projects. Neurophysiologists are more likely to use each other's toothbrushes than each other's data and software; physiological results are hoarded and rarely made accessible online; molecular compounds and transgenic animals are shared only after publication. All of this has made comparisons across laboratories difficult and has slowed progress. At the Allen Institute for Brain Science in Seattle, Washington, we and our colleagues are initiating an experiment in the sociology of neuroscience — a huge endeavour that will involve several hundred scientists, engineers and technicians at the institute. Philanthropist Paul G. Allen, who founded the institute in 2003, has pledged US$300 million for the first four years of an ambitious ten-year plan that will accelerate progress in neuroscience, bringing his total commitment so far to $500 million. Our goal is to attract the best young scientists and build a series of 'brain observatories', with the aim of identifying, recording and intervening in the mouse cerebral cortex, the outermost layer of the brain. Unlike the telescopes that peer at remote events in space and time, our instruments will track the flow of information in complex, interbraided neural circuits within a layer of tissue one millimetre thick. © 2012 Nature Publishing Group,

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